alterlab-scvelo

SKILLWorkflowcommunauté
v0.0.0AlterLab-IEUMITMis à jour il y a 1 moisSource →

Run RNA velocity analysis with scVelo on single-cell RNA-seq data — estimate cell-state transitions from spliced/unspliced mRNA dynamics, infer trajectory direction, compute latent time, and identify driver genes. Use when adding directionality to trajectories or studying differentiation dynamics fr

Community-submitted skill. Not yet reviewed by the Forge team. Full prompt content may not be available.Request review →
59Étoiles du dépôt
1Clients
1Formats
il y a 1 moisDernière mise à jour
Skill
AuteurAlterLab-IEU
Version0.0.0
LicenceMIT
CatégorieWorkflow
Formatsskill.md
PromptNon publié
Compatibilité
Claude✓ Pris en charge
Cursor
Copilot
ChatGPT
Gemini
À propos

Run RNA velocity analysis with scVelo on single-cell RNA-seq data — estimate cell-state transitions from spliced/unspliced mRNA dynamics, infer trajectory direction, compute latent time, and identify driver genes. Use when adding directionality to trajectories or studying differentiation dynamics from spliced/unspliced layers (velocyto/STARsolo output); for the general QC, clustering, UMAP, and di

Mots-clés
skillclaude