Biotech intelligence for AI agents: drugs, targets, diagnostics, PoS estimates, and writeups.
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La vérification confirme l’identité de l’éditeur (la propriété du dépôt), pas la sûreté du code. L’analyse de sécurité couvre les CVE connues et les scripts d’installation suspects.
Lu depuis un véritable échange MCP initialize → tools/list contre l’endpoint déclaré. Aucun outil n’a été invoqué — tools/list est l’appel d’introspection en lecture seule que le protocole prévoit pour cela. Cela reflète ce que le serveur annonçait à cet instant ; un endpoint hébergé n’est figé sur aucune version et peut changer sans préavis.
https://biocosm-mcp.fly.dev/mcp13 outils · 459 mssearch_nodesSearch BioCosm nodes by name, gene symbol, target, therapeutic area, or company.
Results are ranked: exact name/brand matches first, then partial name
matches, with a node-type prior (canonical drug/diagnostic nodes rank above
gene-target nodes, which rank above ChEMBL salt-form duplicates). Nodes…Search BioCosm nodes by name, gene symbol, target, therapeutic area, or company. Results are ranked: exact name/brand matches first, then partial name matches, with a node-type prior (canonical drug/diagnostic nodes rank above gene-target nodes, which rank above ChEMBL salt-form duplicates). Nodes…
| Paramètre | Type | Description |
|---|---|---|
| query* | string | Search term (e.g. "breast cancer", "pembrolizumab", "Merck") |
| limit | integer | Maximum results to return (default 20, max 100) |
get_nodeGet full details for a single BioCosm node: identity and all name aliases,
classification, gene targets and mechanism, therapeutic areas, companies,
revenue history where available (sparse: ~100 drugs, mostly blockbusters,
as annualized quarterly estimates; source links when present), probability-o…Get full details for a single BioCosm node: identity and all name aliases, classification, gene targets and mechanism, therapeutic areas, companies, revenue history where available (sparse: ~100 drugs, mostly blockbusters, as annualized quarterly estimates; source links when present), probability-o…
| Paramètre | Type | Description |
|---|---|---|
| node_id* | string | The node identifier (e.g. "pembrolizumab", "trastuzumab") |
get_writeupGet the full writeup for a BioCosm node, including all sections, citations,
structured data, and validation score.Get the full writeup for a BioCosm node, including all sections, citations, structured data, and validation score.
| Paramètre | Type | Description |
|---|---|---|
| node_id* | string | The node identifier (e.g. "pembrolizumab") |
list_by_therapeutic_areaList all nodes in a given therapeutic area.List all nodes in a given therapeutic area.
| Paramètre | Type | Description |
|---|---|---|
| area* | string | Therapeutic area to search (e.g. "breast cancer", "non-small cell lung cancer") |
| limit | integer | Maximum results (default 50) |
get_company_portfolioGet a company's full drug/diagnostic portfolio from BioCosm.Get a company's full drug/diagnostic portfolio from BioCosm.
| Paramètre | Type | Description |
|---|---|---|
| company_name* | string | Company name (e.g. "Merck", "Roche", "Illumina") |
get_statsGet a high-level overview of the BioCosm database: total nodes, writeups,
companies, breakdowns by type/status/domain, validation scores, and recent
pipeline runs.Get a high-level overview of the BioCosm database: total nodes, writeups, companies, breakdowns by type/status/domain, validation scores, and recent pipeline runs.
Aucun schéma d’entrée n’a été publié pour cet outil.
get_staleness_reportGet writeup staleness report: overall stats, top stale nodes, data source freshness.Get writeup staleness report: overall stats, top stale nodes, data source freshness.
| Paramètre | Type | Description |
|---|---|---|
| limit | integer | Number of top stale nodes to return (default 20) |
get_node_freshnessGet freshness details for a single node: writeup age, enrichment hash match,
staleness score, validation score.Get freshness details for a single node: writeup age, enrichment hash match, staleness score, validation score.
| Paramètre | Type | Description |
|---|---|---|
| node_id* | string | The node identifier (e.g. "pembrolizumab") |
find_by_targetFind all drugs that target a specific gene/protein.Find all drugs that target a specific gene/protein.
| Paramètre | Type | Description |
|---|---|---|
| target_gene* | string | Gene symbol or target name (e.g. "EGFR", "KRAS", "PD-1") |
| limit | integer | Maximum results (default 50, max 200) |
find_by_phaseList drugs/diagnostics at a specific clinical phase.List drugs/diagnostics at a specific clinical phase.
| Paramètre | Type | Description |
|---|---|---|
| phase* | string | One of "approved", "on_market", "phase3", "phase2", "phase1", "in_development", "cleared", "ldt", "ruo" |
| node_type | — | Optional filter — "drug", "pipeline", "diagnostic", "target" |
| limit | integer | Maximum results (default 100, max 500) |
find_relatedFind nodes connected to a given node. Three relationship types are
derived on-the-fly:
- "drug_target": for a drug, the targets it hits (and vice versa for a
target node, the drugs that hit it)
- "same_company": drugs sharing a company with this node
- "same_target_class": drugs with the same m…Find nodes connected to a given node. Three relationship types are derived on-the-fly: - "drug_target": for a drug, the targets it hits (and vice versa for a target node, the drugs that hit it) - "same_company": drugs sharing a company with this node - "same_target_class": drugs with the same m…
| Paramètre | Type | Description |
|---|---|---|
| node_id* | string | Source node identifier |
| link_type | — | Optional filter — one of "drug_target", "same_target_class", "same_company". If None, returns all three groups. |
| limit | integer | Maximum results per link type (default 30) |
get_pos_scoreGet the Probability of Success estimate for a node, including the
base rate, adjustment factors with reasoning, confidence interval, and
model version.
Returns None for nodes without a PoS score (typically only late-stage
pipeline drugs are scored).Get the Probability of Success estimate for a node, including the base rate, adjustment factors with reasoning, confidence interval, and model version. Returns None for nodes without a PoS score (typically only late-stage pipeline drugs are scored).
| Paramètre | Type | Description |
|---|---|---|
| node_id* | string | Node identifier |
get_coverageReport BioCosm's actual data coverage so you never mistake missing data for
a real-world zero. An empty or absent field on a node means "not in BioCosm's
data," never a true zero. BioCosm is AI-generated and may contain errors.Report BioCosm's actual data coverage so you never mistake missing data for a real-world zero. An empty or absent field on a node means "not in BioCosm's data," never a true zero. BioCosm is AI-generated and may contain errors.
Aucun schéma d’entrée n’a été publié pour cet outil.
13 outils sur 13 ont publié une description.
Les noms et descriptions d’outils sont écrits par l’éditeur et affichés tels quels, comme du texte inerte. Ce sont les chaînes qu’un client MCP transmet à un modèle, alors Forge y recherche des motifs d’injection de prompt — tout constat apparaît avec l’analyse de sécurité ci-dessus. « Privilégié » est une correspondance de mot-clé sur le nom de l’outil, pas un audit de ce qu’il fait : un nom anodin peut tout de même tout faire.
Biotech intelligence for AI agents: drugs, targets, diagnostics, PoS estimates, and writeups.
Les noms cliquables ouvrent l’index Forge de toutes les entrées observées exposant cet outil. Parcourir tous les outils indexés.
Cette entrée ne publie aucun paquet npm : Forge n'a donc pas d'arbre de dépendances pour elle. C'est une lacune de couverture — pas une affirmation qu'elle n'a aucune dépendance.