hic-aggregation

SKILLFlusso di lavorocommunity
v0.0.0ammawlaAGPL-3.0Aggiornato 26 g faFonte →

Build comprehensive chromatin contact maps by aggregating Hi-C loop calls (BEDPE) across multiple ENCODE experiments, donors, and labs. Use when the user wants to answer "what regions are in 3D contact in my tissue?" by creating a union catalog of chromatin loops. Handles resolution-aware anchor mat

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26Stelle del repo
1Client
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26 g faUltimo aggiornamento
Skill
Autoreammawla
Versione0.0.0
LicenzaAGPL-3.0
CategoriaFlusso di lavoro
Formatiskill.md
PromptNon pubblicato
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Claude✓ Supportato
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ChatGPT
Gemini
Descrizione

Build comprehensive chromatin contact maps by aggregating Hi-C loop calls (BEDPE) across multiple ENCODE experiments, donors, and labs. Use when the user wants to answer "what regions are in 3D contact in my tissue?" by creating a union catalog of chromatin loops. Handles resolution-aware anchor matching, cross-lab variation, and Hi-C-specific quality metrics.

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