plink2-gwas-analysis

SKILLFlusso di lavorocommunity
v0.0.0jaechang-hitsNOASSERTIONAggiornato 5 g faFonte →

GWAS and population genetics tool. Processes PLINK (.bed/.bim/.fam), VCF, and BGEN; runs QC (MAF, HWE, missingness), IBD estimation, PCA, and linear/logistic regression GWAS. Outputs Manhattan-ready summary stats. Use regenie or SAIGE for biobanks (>100k samples) needing mixed models.

Community-submitted skill. Not yet reviewed by the Forge team. Full prompt content may not be available.Request review →
336Stelle del repo
1Client
1Formati
5 g faUltimo aggiornamento
Skill
Autorejaechang-hits
Versione0.0.0
LicenzaNOASSERTION
CategoriaFlusso di lavoro
Formatiskill.md
PromptNon pubblicato
Compatibilità
Claude✓ Supportato
Cursor—
Copilot—
ChatGPT—
Gemini—
Descrizione

GWAS and population genetics tool. Processes PLINK (.bed/.bim/.fam), VCF, and BGEN; runs QC (MAF, HWE, missingness), IBD estimation, PCA, and linear/logistic regression GWAS. Outputs Manhattan-ready summary stats. Use regenie or SAIGE for biobanks (>100k samples) needing mixed models.

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