rdkit-conf

SKILLFlusso di lavorocommunity
v0.0.0jinzhezenggroupLGPL-3.0Aggiornato 7 g faFonte →

A standardized CLI wrapper for RDKit 3D/2D conformer generation that samples multiple conformers per molecule (ETKDGv3, default 10), optimizes each with a force field (MMFF94s/UFF), keeps the lowest-energy conformer, automatically falls back to 2D layout on total embedding failure with a printed war

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128Stelle del repo
1Client
1Formati
7 g faUltimo aggiornamento
Skill
Autorejinzhezenggroup
Versione0.0.0
LicenzaLGPL-3.0
CategoriaFlusso di lavoro
Formatiskill.md
PromptNon pubblicato
Compatibilità
Claude✓ Supportato
Cursor
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ChatGPT
Gemini
Descrizione

A standardized CLI wrapper for RDKit 3D/2D conformer generation that samples multiple conformers per molecule (ETKDGv3, default 10), optimizes each with a force field (MMFF94s/UFF), keeps the lowest-energy conformer, automatically falls back to 2D layout on total embedding failure with a printed warning, and writes results to SDF or XYZ format. USE WHEN you need to generate 3D (or 2D fallback) mol

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