arboreto-grn-inference

SKILLWorkflowcommunity
v0.0.0jaechang-hitsNOASSERTIONUpdated 1mo agoSource →

GRN inference from expression via GRNBoost2 (gradient boosting) or GENIE3 (Random Forest). Load matrix, filter by TFs, infer TF-target-importance links, save network. Dask-parallelized to single-cell scale. Core SCENIC component.

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1mo agoLast update
Skill
Authorjaechang-hits
Version0.0.0
LicenseNOASSERTION
CategoryWorkflow
Formatsskill.md
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GRN inference from expression via GRNBoost2 (gradient boosting) or GENIE3 (Random Forest). Load matrix, filter by TFs, infer TF-target-importance links, save network. Dask-parallelized to single-cell scale. Core SCENIC component.

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skillclaude

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