bio-applied-cite-seq-integration

SKILLWorkflowcommunity
v0.0.0Pavel-KravchenkoUnknownUpdated 1mo agoSource →

Normalize CITE-seq ADT counts (CLR/DSB) and build WNN graphs joining RNA+protein or RNA+ATAC with muon/Seurat FindMultiModalNeighbors. Use for CITE-seq, 10x Multiome, or paired RNA+ADT/ATAC single-cell integration.

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1mo agoLast update
Skill
AuthorPavel-Kravchenko
Version0.0.0
LicenseUnknown
CategoryWorkflow
Formatsskill.md
PromptNot published
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About

Normalize CITE-seq ADT counts (CLR/DSB) and build WNN graphs joining RNA+protein or RNA+ATAC with muon/Seurat FindMultiModalNeighbors. Use for CITE-seq, 10x Multiome, or paired RNA+ADT/ATAC single-cell integration.

Keywords
skillclaude