bio-applied-genome-assembly

SKILLWorkflowcommunity
v0.0.0Pavel-KravchenkoUnknownUpdated 3mo agoSource →

Implement OLC and de Bruijn assembly algorithms, compute N50/L50/NG50 stats, and run SPAdes/Flye/hifiasm on Illumina/HiFi/ONT reads. Use for k-mer graphs, comparing assemblers, or a FASTQ-to-contigs pipeline.

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3mo agoLast update
Skill
AuthorPavel-Kravchenko
Version0.0.0
LicenseUnknown
CategoryWorkflow
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Implement OLC and de Bruijn assembly algorithms, compute N50/L50/NG50 stats, and run SPAdes/Flye/hifiasm on Illumina/HiFi/ONT reads. Use for k-mer graphs, comparing assemblers, or a FASTQ-to-contigs pipeline.

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