bio-applied-isoform-analysis

SKILLWorkflowcommunity
v0.0.0Pavel-KravchenkoUnknownUpdated 3mo agoSource →

Align ONT/PacBio long reads with Minimap2 splice, call isoforms with bambu (NDR), test differential isoform usage with DRIMSeq. Use for long-read transcriptomics, novel isoform calling, or DTU/isoform-switch analysis.

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3mo agoLast update
Skill
AuthorPavel-Kravchenko
Version0.0.0
LicenseUnknown
CategoryWorkflow
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Align ONT/PacBio long reads with Minimap2 splice, call isoforms with bambu (NDR), test differential isoform usage with DRIMSeq. Use for long-read transcriptomics, novel isoform calling, or DTU/isoform-switch analysis.

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