bio-applied-mageck-gene-essentiality

SKILLWorkflowcommunity
v0.0.0Pavel-KravchenkoUnknownUpdated 1mo agoSource →

Run MAGeCK count/test on pooled CRISPR sgRNA screens, scoring gene essentiality via RRA, FDR, and log2 fold-change. Use when analyzing CRISPR screen FASTQ/count data, calling essential or drug-resistance genes, or benchmarking vs DepMap.

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1mo agoLast update
Skill
AuthorPavel-Kravchenko
Version0.0.0
LicenseUnknown
CategoryWorkflow
Formatsskill.md
PromptNot published
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Claude✓ Supported
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About

Run MAGeCK count/test on pooled CRISPR sgRNA screens, scoring gene essentiality via RRA, FDR, and log2 fold-change. Use when analyzing CRISPR screen FASTQ/count data, calling essential or drug-resistance genes, or benchmarking vs DepMap.

Keywords
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