bio-applied-ppi-networks

SKILLWorkflowcommunity
v0.0.0Pavel-KravchenkoUnknownUpdated 1mo agoSource →

Build and analyze protein-protein interaction (PPI) networks from STRING DB with NetworkX: compute degree/betweenness/closeness/eigenvector centrality, classify hub and bottleneck genes, test scale-free topology, and detect network communities/modules (Louvain, greedy modularity). Use when asked to

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1mo agoLast update
Skill
AuthorPavel-Kravchenko
Version0.0.0
LicenseUnknown
CategoryWorkflow
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Build and analyze protein-protein interaction (PPI) networks from STRING DB with NetworkX: compute degree/betweenness/closeness/eigenvector centrality, classify hub and bottleneck genes, test scale-free topology, and detect network communities/modules (Louvain, greedy modularity). Use when asked to find hub genes, identify drug targets from a network, query the STRING API, build a gene interaction

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