biomcp

MCPcommunity
v1.1.1io.github.yeyuan98Apache-2.0Updated 4d agonpmGitHub

BioMCP-TS — TypeScript biomedical MCP server (genes, variants, trials, literature, patents, R analysis)

Works in
ClaudeCursorCopilotGemini

Inferred from the transports this listing declares (stdio). A client not listed here hasn’t been ruled out — it just isn’t something Forge can confirm.

Automatically indexed from public sources. Not yet verified by the developer on Forge.Claim this listing →
988Downloads/wk
12GitHub stars
4d agoLast update
Reads these credentials
  • NCBI_API_KEYAPI keyoptional

    Higher NCBI E-utilities rate limits (3 -> 10 req/s)

  • S2_API_KEYAPI keyoptional

    Higher Semantic Scholar rate limits

  • OPENFDA_API_KEYAPI keyoptional

    Higher OpenFDA rate limits

  • ONCOKB_TOKENAPI keyoptional

    Required by the variant_oncokb tool (OncoKB annotations)

  • DISGENET_API_KEYAPI keyoptional

    Required for DisGeNET disease-gene associations

Declared by the author in the official MCP registry. Forge does not store, broker, or ever see these values — the config below is scaffolded with placeholders you fill in locally.

Package
Authorio.github.yeyuan98
LicenseApache-2.0
Version1.1.1
Sourcenpm+mcp-registry
npmbiomcp
GitHubyeyuan98/biomcp-ts
SBOMCycloneDX 1.6 ↓
Trust Status
B
60/100Good
✓Listed in Forge index+10/10
—Publisher identity verified+0/20
→ Publisher: run `forge publish` from the package repo to claim ownership
—Ed25519 publish signature+0/5
→ Included automatically when the publisher runs `forge publish`
—Domain verification+0/5
→ Publisher: host /.well-known/forge.json on the package homepage with { "publisher": "<github-login>" }
—npm Trusted Publishing (Sigstore)+0/5
→ Publish from GitHub Actions with --provenance so the attestation binds this package to this repo
—npm maintainer match+0/5
→ Earned once your identity is verified above and that login is an npm maintainer of this package
✓CVE scan · clean+30/30
✓Static analysis · clean+20/20
Paste into Claude Code, Cursor, or any AI assistant to fix all gaps
StatusCommunity-indexed
PublisherUnverified
SignatureUnsigned
Domain—
Provenance—
Dependencies✓ 1 resolved · none vulnerable
Tool surface—
Security scan✓ Cleanv1.1.1 · todayHow well does this scan work?
EvalsNone
IndexedAug 31, 2026

Verification confirms publisher identity (repo ownership), not code safety. The security scan covers known CVEs and suspicious install scripts.

Tools

No tool declarations found in the source19m ago

Forge read 4 source files from the published package tarball and matched no MCP tool registrations. Extraction is pattern-based over shipped source: a server that builds its tool list at runtime, or that ships only bundled or minified code, registers nothing this can see. Treat it as “not detected”, not as “exposes none”.

About

BioMCP-TS — TypeScript biomedical MCP server (genes, variants, trials, literature, patents, R analysis)

Keywords
mcpmcp-servermodel-context-protocolbioinformaticsbiomedicaltypescriptpubmedclinical-trialsbiomcp-ts
Alternatives
Comparing tool surfaces…

Dependency tree

What one Forge scan resolved from npm metadata on 2026-09-07 — observed resolution, not a publisher declaration.

1 packages resolved · 1 direct · none carrying advisories Resolution stops at depth 4 and 60 packages.

Topics

Related in research & science