hic-aggregation

SKILLWorkflowcommunity
v0.0.0ammawlaAGPL-3.0Updated 21d agoSource →

Build comprehensive chromatin contact maps by aggregating Hi-C loop calls (BEDPE) across multiple ENCODE experiments, donors, and labs. Use when the user wants to answer "what regions are in 3D contact in my tissue?" by creating a union catalog of chromatin loops. Handles resolution-aware anchor mat

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21d agoLast update
Skill
Authorammawla
Version0.0.0
LicenseAGPL-3.0
CategoryWorkflow
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About

Build comprehensive chromatin contact maps by aggregating Hi-C loop calls (BEDPE) across multiple ENCODE experiments, donors, and labs. Use when the user wants to answer "what regions are in 3D contact in my tissue?" by creating a union catalog of chromatin loops. Handles resolution-aware anchor matching, cross-lab variation, and Hi-C-specific quality metrics.

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