pathway-enrichment

SKILLWorkflowcommunity
v0.0.0K-Dense-AIMITUpdated todaySource →

Run pathway and gene-set enrichment analysis on gene lists or ranked gene data, then interpret the results. Use whenever the user has a set of genes (differentially expressed genes from PyDESeq2/Scanpy, CRISPR-screen hits, cluster marker genes, proteomics hits) and wants to know which biological pat

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Skill
AuthorK-Dense-AI
Version0.0.0
LicenseMIT
CategoryWorkflow
Formatsskill.md
PromptOpen (see Prompt tab)
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Claude✓ Supported
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Gemini
About

Run pathway and gene-set enrichment analysis on gene lists or ranked gene data, then interpret the results. Use whenever the user has a set of genes (differentially expressed genes from PyDESeq2/Scanpy, CRISPR-screen hits, cluster marker genes, proteomics hits) and wants to know which biological pathways, GO terms, or gene sets are over-represented or enriched. Covers over-representation analysis

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