single-cell-annotation-guide

SKILLWorkflowcommunity
v0.0.0jaechang-hitsNOASSERTIONUpdated 1d agoSource →

Decision framework for manual marker-based, automated (CellTypist), and reference-based (popV) cell type annotation in scRNA-seq. Three-tier strategy: Tier 1 manual markers, Tier 2 CellTypist, Tier 3 popV ensemble transfer. Use when planning or troubleshooting annotation.

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1d agoLast update
Skill
Authorjaechang-hits
Version0.0.0
LicenseNOASSERTION
CategoryWorkflow
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Decision framework for manual marker-based, automated (CellTypist), and reference-based (popV) cell type annotation in scRNA-seq. Three-tier strategy: Tier 1 manual markers, Tier 2 CellTypist, Tier 3 popV ensemble transfer. Use when planning or troubleshooting annotation.

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